percent_clusters: Percentage detected per cluster
In clustifyr: Classifier for Single-cell RNA-seq Using Cell Clusters
Description
Usage
Arguments
Value
Description
Percentage detected per cluster
Usage
1
percent_clusters(mat, metadata, cluster_col = "cluster", cut_num = 0.5)
Arguments
mat
expression matrix
metadata
data.frame with cells
cluster_col
column in metadata with cluster number
cut_num
binary cutoff for detection
Value
matrix of numeric values, with genes for row names,
and clusters for column names
clustifyr documentation built on Nov. 8, 2020, 5:32 p.m.
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Description Usage Arguments Value
Description
Percentage detected per cluster
Usage
1 | percent_clusters(mat, metadata, cluster_col = "cluster", cut_num = 0.5)
|
Arguments
mat |
expression matrix |
metadata |
data.frame with cells |
cluster_col |
column in metadata with cluster number |
cut_num |
binary cutoff for detection |
Value
matrix of numeric values, with genes for row names, and clusters for column names
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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