seurat_meta: Function to convert labelled seurat object to fully prepared...
In clustifyr: Classifier for Single-cell RNA-seq Using Cell Clusters
Description
Usage
Arguments
Value
Examples
View source: R/seurat_wrapper.R
Description
Function to convert labelled seurat object to fully prepared metadata
Usage
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seurat_meta(seurat_object, ...)
## S3 method for class 'seurat'
seurat_meta(seurat_object, dr = "umap", ...)
## S3 method for class 'Seurat'
seurat_meta(seurat_object, dr = "umap", ...)
Arguments
seurat_object
seurat_object after tsne or
umap projections and clustering
...
additional arguments
dr
dimension reduction method
Value
dataframe of metadata, including dimension reduction plotting info
Examples
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## Not run:
seurat_meta(s_small)
## End(Not run)
clustifyr documentation built on Nov. 8, 2020, 5:32 p.m.
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Description Usage Arguments Value Examples
View source: R/seurat_wrapper.R
Description
Function to convert labelled seurat object to fully prepared metadata
Usage
1 2 3 4 5 6 7 | seurat_meta(seurat_object, ...)
## S3 method for class 'seurat'
seurat_meta(seurat_object, dr = "umap", ...)
## S3 method for class 'Seurat'
seurat_meta(seurat_object, dr = "umap", ...)
|
Arguments
seurat_object |
seurat_object after tsne or umap projections and clustering |
... |
additional arguments |
dr |
dimension reduction method |
Value
dataframe of metadata, including dimension reduction plotting info
Examples
1 2 3 4 | ## Not run:
seurat_meta(s_small)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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