Files in flowCore
flowCore: Basic structures for flow cytometry data

hyperlog.notice.html
DESCRIPTION
README.md
NAMESPACE
src/logicleTransform.cpp
src/convertRawBytes.cpp
src/convertRawBytes.h
src/fcsTextParse.cpp
src/flowCore_types.h
src/zeroin.cpp
src/inPolygon.cpp
src/hyperlog.h
src/sortBytes.cpp
src/RcppExports.cpp
src/Hyperlog.cpp
src/Logicle.cpp
src/pairVectorRcppWrap.cpp
src/biexponential.cpp
src/pairVectorRcppWrap.h
src/logicle.h
src/FastLogicle.cpp
src/inPolytope.cpp
src/Makevars
src/zeroin.h
src/uint2double.cpp
src/hyperlogTransform.cpp
data/GvHD.rda
data/datalist
examples/example1.r examples/example2.R
vignettes/HowTo-flowCore.Rnw
paper/Figure2-flowWheel-version4.jpg
paper/xyplot.pdf
paper/manuscript.tex
paper/flowCoreRef.bib
paper/bmc_article.bib
paper/bmc_article.cls
paper/figure.R
paper/bmc_article.bst
paper/Figure1.ppt
paper/bmc_article.tex
paper/Figure1-flowCoreFrameWork.jpg
paper/flowQ.jpg
paper/response2reviewers.rtf
paper/outline.tex
tests/testthat.R tests/testthat/IO-testSuite.R tests/testthat/test-classes.R tests/testthat/test-sortBytes.R tests/testthat/test-filter.R tests/testthat/test-fcsTextParse.R tests/testthat/test-fr-methods.R tests/testthat/helper-expectResults.R tests/testthat/test-flowSet-IO.R tests/testthat/test-markernames.R tests/testthat/test-convertRawBytes.R
tests/testthat/expectRes.new.rds
tests/testthat/test-transform.R tests/testthat/test-gating.R
tests/testthat/expectResults.rds
tests/testthat/test-paramMatch.R
build/vignette.rds
R/transformList-accessors.R R/manyFilterResult-accessors.R R/in-methods.R R/AllClasses.R R/AllGenerics.R R/flowSet-accessors.R R/gatingML.R R/multipleFilterResult-accessors.R R/parameters-methods.R R/actionItem-accessors.R R/utils.R R/names-methods.R R/FCSTransTransform.R R/RcppExports.R R/view-accessors.R R/rectangleGate-accessors.R R/split-methods.R R/eval-methods.R R/summarizeFilter-methods.R R/logicalFilterResult-accessors.R R/flowFrame-accessors.R R/fcReference-accessors.R R/workFlow-accessors.R R/filterResultList-accessors.R R/Rm-methods.R R/median-logicle-transform.R R/IO.R R/filterResult-accessors.R R/identifier-methods.R R/on-methods.R R/filterSet-accessors.R R/show-methods.R R/summary-methods.R R/coerce.R R/filterSummary-accessors.R R/length-methods.R R/initialize-methods.R man/read.FCS.Rd man/fsApply.Rd man/EHtrans-class.Rd man/FCSTransTransform.Rd man/filterReference-class.Rd man/transform-class.Rd man/subsetting-class.Rd man/kmeansFilter.Rd man/hyperlogtGml2-class.Rd man/split-methods.Rd man/GvHD.Rd man/norm2Filter-class.Rd man/transformation-class.Rd man/filterResultList-class.Rd man/getChannelMarker.Rd man/filterSummary-class.Rd man/lintGml2-class.Rd man/each_col-methods.Rd man/asinhtGml2-class.Rd man/parameters-methods.Rd man/linearTransform.Rd man/asinht-class.Rd man/filterResult-class.Rd man/filter-methods.Rd man/normalization-class.Rd man/manyFilterResult-class.Rd man/spillover-flowSet.Rd man/quadraticTransform.Rd man/flowFrame-class.Rd man/multipleFilterResult-class.Rd man/flowSet-class.Rd man/parameterTransform-class.Rd man/transformFilter-class.Rd man/ratiotGml2-class.Rd man/setOperationFilter-class.Rd man/ratio-class.Rd man/filters-class.Rd man/compensateActionItem-class.Rd man/write.flowSet.Rd man/filterSet-class.Rd man/sampleFilter-class.Rd man/sinht-class.Rd man/invsplitscale-class.Rd man/quadratic-class.Rd man/quadGate.Rd man/randomFilterResult-class.Rd man/logtGml2-class.Rd man/transformActionItem-class.Rd man/filter-class.Rd man/Subset-methods.Rd man/normalizeView-class.Rd man/splitScaleTransform.Rd man/expressionFilter-class.Rd man/write.FCS.Rd man/unitytransform-class.Rd man/subsettingActionItem-class.Rd man/summarizeFilter-methods.Rd man/logicleTransform.Rd man/filterSummaryList-class.Rd man/squareroot-class.Rd man/hyperlog-class.Rd man/keyword-methods.Rd man/logarithm-class.Rd man/arcsinhTransform.Rd man/actionItem-class.Rd man/timeFilter-class.Rd man/parameters-class.Rd man/boundaryFilter-class.Rd man/transformMap-class.Rd man/filter-on-methods.Rd man/subsettingView-class.Rd man/parameterFilter-class.Rd man/transformReference-class.Rd man/polytopeGate.Rd man/filterDetails-methods.Rd man/scaleTransform.Rd man/rectangleGate.Rd man/getIndexSort-methods.Rd man/truncateTransform.Rd man/lnTransform.Rd man/estimateMedianLogicle.Rd man/gateView-class.Rd man/compensateView-class.Rd man/logTransform.Rd man/filterList-class.Rd man/polygonGate.Rd man/compensation-class.Rd man/logicletGml2-class.Rd man/workFlow-class.Rd man/flowCore-package.Rd man/identifier-methods.Rd man/transformList-class.Rd man/read.flowSet.Rd man/filter-in-methods.Rd man/biexponentialTransform.Rd man/transformView-class.Rd man/normalizeActionItem-class.Rd man/filter-and-methods.Rd man/dg1polynomial-class.Rd man/coerce.Rd man/gateActionItem-class.Rd man/exponential-class.Rd man/validFilters.Rd man/fcReference-class.Rd man/ellipsoidGate.Rd man/view-class.Rd man/singleParameterTransform-class.Rd man/read.FCSheader.Rd man/checkOffset.Rd man/logicalFilterResult-class.Rd man/compensatedParameter-class.Rd man/inverseLogicleTransform.Rd man/markernames.Rd man/characterOrTransformation-class.Rd man/splitscale-class.Rd man/concreteFilter-class.Rd
inst/NEWS
inst/doc/cytoref.bib
inst/doc/HowTo-flowCore.Rnw
inst/doc/fcs3.html
inst/doc/HowTo-flowCore.R inst/doc/HowTo-flowCore.pdf
inst/scripts/smoothScatter/backcol.jpg
inst/scripts/smoothScatter/foreground.jpg
inst/scripts/smoothScatter/backhue.jpg
inst/scripts/smoothScatter/testBlendEBImage.R
inst/scripts/smoothScatter/backsat.jpg
inst/scripts/smoothScatter/examples.R
inst/scripts/smoothScatter/backgray.jpg
inst/scripts/smoothScatter/smoothScatterMult.R
inst/scripts/smoothScatter/backval.jpg
inst/scripts/smoothScatter/blendFuns.R
inst/extdata/0877408774.E07
inst/extdata/0877408774.B08
inst/extdata/0877408774.F06
inst/extdata/compdata/compmatrix
inst/extdata/compdata/data/060909.003
inst/extdata/compdata/data/060909.004
inst/extdata/compdata/data/060909.005
inst/extdata/compdata/data/060909.002
inst/extdata/compdata/data/060909.001
flowCore documentation built on Nov. 17, 2017, 11:43 a.m.