genefu: Computation of Gene Expression-Based Signatures in Breast Cancer

Description: This package contains functions implementing various tasks usually required by gene expression analysis, especially in breast cancer studies: gene mapping between different microarray platforms, identification of molecular subtypes, implementation of published gene signatures, gene selection, and survival analysis.

Package details

AuthorDeena M.A. Gendoo, Natchar Ratanasirigulchai, Markus S. Schroeder, Laia Pare, Joel S. Parker, Aleix Prat, and Benjamin Haibe-Kains
Bioconductor views Classification Clustering DifferentialExpression GeneExpression Visualization
MaintainerBenjamin Haibe-Kains <benjamin.haibe.kains@utoronto.ca>
LicenseArtistic-2.0
Version2.22.1
URL http://www.pmgenomics.ca/bhklab/software/genefu
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("genefu")

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genefu documentation built on Jan. 28, 2021, 2:01 a.m.