mod1: Gene modules published in Desmedt et al. 2008

Description Usage Format Source References Examples

Description

List of seven gene modules published in Desmedt et a. 2008, i.e. ESR1 (estrogen receptor pathway), ERBB2 (her2/neu receptor pathway), AURKA (proliferation), STAT1 (immune response), PLAU (tumor invasion), VEGF (angogenesis) and CASP3 (apoptosis).

Usage

1

Format

mod1 is a list of seven gene signatures, i.e. matrices with 3 columns containing the annotations and information related to the signatures themselves.

Source

http://clincancerres.aacrjournals.org/content/14/16/5158.abstract?ck=nck

References

Desmedt C, Haibe-Kains B, Wirapati P, Buyse M, Larsimont D, Bontempi G, Delorenzi M, Piccart M, and Sotiriou C (2008) "Biological processes associated with breast cancer clinical outcome depend on the molecular subtypes", Clinical Cancer Research, 14(16):5158–5165.

Examples

1

genefu documentation built on Nov. 1, 2018, 2:25 a.m.