mod2: Gene modules published in Wirapati et al. 2008

In genefu: Computation of Gene Expression-Based Signatures in Breast Cancer

Description

List of seven gene modules published in Wirapati et a. 2008, i.e. ESR1 (estrogen receptor pathway), ERBB2 (her2/neu receptor pathway) and AURKA (proliferation).

Usage

data(mod2)

Format

mod2 is a list of three gene signatures, i.e. matrices with 3 columns containing the annotations and information related to the signatures themselves.

Source

http://breast-cancer-research.com/content/10/4/R65

References

Wirapati P, Sotiriou C, Kunkel S, Farmer P, Pradervand S, Haibe-Kains B, Desmedt C, Ignatiadis M, Sengstag T, Schutz F, Goldstein DR, Piccart MJ and Delorenzi M (2008) "Meta-analysis of Gene-Expression Profiles in Breast Cancer: Toward a Unified Understanding of Breast Cancer Sub-typing and Prognosis Signatures", Breast Cancer Research, 10(4):R65.

Examples

data(mod2)

genefu documentation built on Jan. 28, 2021, 2:01 a.m.