Files in hypeR

An R Package For Geneset Enrichment Workflows

NEWS.md README.md R/hyp_hmap.R R/rgsets.R R/ggempty.R R/hype.R R/hyp_emap.R R/utils.R R/db_enrichr.R R/ks_enrichment.R R/hyp.R R/db_hyper.R R/hyp_to_table.R R/ggeplot.R R/multihyp.R R/ggvenn.R R/hyp_to_excel.R R/pvector.R R/db_msig.R R/hyp_to_rmd.R R/reactable.R R/hyp_show.R R/gsets.R R/data.R R/hyper_enrichment.R R/hyp_dots.R R/shiny_modules.R vignettes/hypeR.Rmd vignettes/docs/basics.Rmd vignettes/docs/reporting.Rmd vignettes/docs/shiny.Rmd vignettes/docs/multihyp.Rmd vignettes/docs/visualize.Rmd vignettes/docs/data.Rmd vignettes/docs/installation.Rmd man/hyp_dots.Rd man/hyperdb_info.Rd man/pvector.Rd man/dot-ks_enrichment.Rd man/ggeplot.Rd man/limma.Rd man/dot-string_args.Rd man/enrichr_gsets.Rd man/msigdb_check_species.Rd man/dot-jaccard_similarity.Rd man/gsets.Rd man/hyp_to_table.Rd man/clean_genesets.Rd man/dot-kstest.Rd man/enrichr_urls.Rd man/rctbl_hyp.Rd man/msigdb_gsets.Rd man/dot-dots_plot.Rd man/msigdb_info.Rd man/ggempty.Rd man/rgsets.Rd man/hyperdb_rgsets.Rd man/msigdb_version.Rd man/rctbl_mhyp.Rd man/dot-hiearchy_map.Rd man/genesets_Server.Rd man/dot-dots_multi_plot.Rd man/msigdb_download.Rd man/wgcna.Rd man/dot-hyper_enrichment.Rd man/enrichr_connect.Rd man/msigdb_species.Rd man/dot-reverselog_trans.Rd man/multihyp.Rd man/hypeR.Rd man/dot-find_members.Rd man/enrichr_available.Rd man/genesets_UI.Rd man/msigdb_available.Rd man/enrichr_download.Rd man/hyp_show.Rd man/dot-enrichment_map.Rd man/rctbl_build.Rd man/hyp.Rd man/hyp_to_rmd.Rd man/dot-format_str.Rd man/dot-check_overlap.Rd man/hyp_to_excel.Rd man/hyp_hmap.Rd man/dot-overlap_similarity.Rd man/ggvenn.Rd man/hyp_emap.Rd tests/testthat.R tests/testthat/test-hyp_show.R tests/testthat/test-pvector.R tests/testthat/test-hyp_to_rmd.R tests/testthat/test-hyp_dots.R tests/testthat/test-ggeplot.R tests/testthat/test-ggvenn.R tests/testthat/test-multihyp.R tests/testthat/test-rgsets.R tests/testthat/test-hyp.R tests/testthat/test-hype.R tests/testthat/test-hyp_to_excel.R tests/testthat/test-gsets.R tests/testthat/test-hyp_emap.R tests/testthat/test-hyp_hmap.R tests/testthat/test-hyp_to_table.R inst/doc/hypeR.R inst/doc/hypeR.Rmd inst/script/testdat.R