Installation

In hypeR: An R Package For Geneset Enrichment Workflows

We recommend the latest version of R (>= 4.0.0) but hypeR currently requires R (>= 3.6.0) to be installed directly from Github or Bioconductor. To install with R (>= 3.5.0) see below. Use with R (\< 3.5.0) is not recommended.

Install the development version of the package from Github.

devtools::install_github("montilab/hypeR")

Or install the development version of the package from Bioconductor.

BiocManager::install("montilab/hypeR", version="devel")

Or install with Conda.

conda create --name hyper
source activate hyper
conda install -c r r-devtools
R
library(devtools)
devtools::install_github("montilab/hypeR")

Or install with previous versions of R.

git clone https://github.com/montilab/hypeR
nano hypeR/DESCRIPTION
# Change Line 8
# Depends: R (>= 3.6.0) -> Depends: R (>= 3.5.0)
R
install.packages("path/to/hypeR", repos=NULL, type="source")

Load the package into an R session.

library(hypeR)

hypeR documentation built on Nov. 8, 2020, 8:19 p.m.