oncostrip: draw an oncostrip similar to cBioportal oncoprinter output.

Description Usage Arguments Details Value See Also Examples

View source: R/oncostrip.R

Description

draw an oncostrip similar to cBioportal oncoprinter output.

Usage

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oncostrip(maf = NULL, ...)

Arguments

maf

an MAF object generated by read.maf

...

arguments passed oncoplot

Details

This is just a wrapper around oncoplot with drawRowBar and drawColBar set to FALSE

Value

None.

See Also

oncoplot

Examples

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laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
dev.new()
oncostrip(maf = laml, genes = c('NPM1', 'RUNX1'))

maftools documentation built on Feb. 6, 2021, 2 a.m.