Description Usage Arguments Value See Also
View source: R/plotSignatures.R
Takes results from extractSignatures
and plots decomposed mutational signatures as a barplot.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 |
nmfRes |
results from |
contributions |
If TRUE plots contribution of signatures in each sample. |
color |
colors for each Ti/Tv conversion class. Default NULL |
patient_order |
User defined ordering of samples. Default NULL. |
font_size |
font size. Default 1.2 |
show_title |
If TRUE compares signatures to COSMIC signatures and prints them as title |
sig_db |
Only applicable if show_title is TRUE. Can be |
axis_lwd |
axis width. Default 2. |
title_size |
size of title. Default 1.3 |
show_barcodes |
Default FALSE |
yaxisLim |
Default 0.3. If NA autoscales. |
... |
further plot options passed to |
Nothing
trinucleotideMatrix
plotSignatures
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