ReadExtResult: Read results from other methods

In miRLAB: Dry lab for exploring miRNA-mRNA relationships

Description

Read the results predicted by external methods (methods that are not in this package and may not be implemented in R). Consequently, we can compare the results predicted by the external methods and results predicted by the methods in the miRLAB package.

Usage

ReadExtResult(datacsv, cause, effect, ExtCEcsv)

Arguments

datacsv	the input dataset in csv format
cause	the column range that specifies the causes (miRNAs), e.g. 1:35
effect	the column range that specifies the effects (mRNAs), e.g. 36:2000
ExtCEcsv	score matrix predicted by an external matrix with columns are miRNAs and rows are mRNAs.

Value

a matrix of scores predicted by an external matrix and ready for further validation and comparison tasks.

Examples

print("GenemiR=ReadExtResult(dataset, cause=1:3, effect=4:18, 'genemirresults.csv')")

miRLAB documentation built on Nov. 8, 2020, 5:45 p.m.