iqrFilter: Interquantile filtering with a mouse click
In oneChannelGUI: A graphical interface designed to facilitate analysis of microarrays and miRNA/RNA-seq data on laptops

Description Usage Details Note Author(s) References See Also

This function implements the interquantile filtering proposed by Heydebreck in 2004

1	iqrFilter()

The aim of non specific filtering is to remove the genes that are unlikely to carry information about the phenotypes under investigation. This filtering remove genes that show little changes within the experimental points.

Factor analysis will be limited by the problem of having fewer samples than genes. Therefore, preselecting a smaller set of genes is definetively helpful.

Raffaele A Calogero

Heydebreck et al. Bioconductor project Papers 2004

IPAlistFilter, listFilter, intensityFilter

oneChannelGUI documentation built on Nov. 17, 2017, 11:02 a.m.