ncScaffold: stand alone function to generate a scaffold containing only...
In oneChannelGUI: A graphical interface designed to facilitate analysis of microarrays and miRNA/RNA-seq data on laptops
Description
Usage
Arguments
Details
Author(s)
Description
The scaffold contains chr stand start and end position of ncRNA. ENSEMBL retrieved spicies are
miRNA,Mt_rRNA,Mt_tRNA,rRNA,snoRNA,snRNA
Usage
1
ncScaffold(genome, fasta)
Arguments
genome
The genome code for H sapiens is hg19, for M musculus is mm9 and for R norvegicus is rn4
fasta
If fasta is TRUE a fasta file with the sequences retrieved by ncScaffold will be produced
Details
The scaffold is used to map reads data into regions only associated to ncRNAs
Author(s)
Raffaele A Calogero
oneChannelGUI documentation built on Nov. 17, 2017, 11:02 a.m.
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Description Usage Arguments Details Author(s)
Description
The scaffold contains chr stand start and end position of ncRNA. ENSEMBL retrieved spicies are miRNA,Mt_rRNA,Mt_tRNA,rRNA,snoRNA,snRNA
Usage
1 | ncScaffold(genome, fasta)
|
Arguments
genome |
The genome code for H sapiens is hg19, for M musculus is mm9 and for R norvegicus is rn4 |
fasta |
If fasta is TRUE a fasta file with the sequences retrieved by ncScaffold will be produced |
Details
The scaffold is used to map reads data into regions only associated to ncRNAs
Author(s)
Raffaele A Calogero
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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