calculateBatchRPM: calculate read per million (RPM) for replicates analysis

Description Usage Arguments Author(s) See Also Examples

Description

Normalize 3C-Seq data by transforming raw reads to read per million per each region for replication analysis

Usage

1
calculateBatchRPM(object,normalized_method=c("powerlawFittedRPM","normalRPM"))

Arguments

object

r3CseqInBatch object

normalized_method

character. method of normalization (default=powerlawFittedRPM)

Author(s)

S. Thongjuea

See Also

calculateRPM, expRPM contrRPM

Examples

1
#See the vignette

r3Cseq documentation built on Nov. 8, 2020, 6:26 p.m.