This function layouts a regulatory graph and plots it using Rgraphviz.
This function takes a regulatory graph as generated by pathway2regulatoryGraph and plots it using standard layout options of layoutRegulatoryGraph. This function is a wrapper for layoutRegulatoryGraph with standard parameters. Subgraphs can be painted with different colors. This can be done by passing parameter subgraph a list of character vectors with node names.
graphNEL, regulatory graph
list of character vectors with node names
logical. If FALSE the graph is not laid out again but send directly to Rgraphviz::renderGraph.
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