splatter: Simple Simulation of Single-cell RNA Sequencing Data

Splatter is a package for the simulation of single-cell RNA sequencing count data. It provides a simple interface for creating complex simulations that are reproducible and well-documented. Parameters can be estimated from real data and functions are provided for comparing real and simulated datasets.

Package details

AuthorLuke Zappia [aut, cre] (<https://orcid.org/0000-0001-7744-8565>), Belinda Phipson [aut] (<https://orcid.org/0000-0002-1711-7454>), Christina Azodi [ctb] (<https://orcid.org/0000-0002-6097-606X>), Alicia Oshlack [aut] (<https://orcid.org/0000-0001-9788-5690>)
Bioconductor views GeneExpression ImmunoOncology RNASeq Sequencing SingleCell Software Transcriptomics
MaintainerLuke Zappia <luke@lazappi.id.au>
LicenseGPL-3 + file LICENSE
URL https://github.com/Oshlack/splatter
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


Try the splatter package in your browser

Any scripts or data that you put into this service are public.

splatter documentation built on Dec. 3, 2020, 2:01 a.m.