kersplatSelectRegs: Select Kersplat regulators
In splatter: Simple Simulation of Single-cell RNA Sequencing Data
Description
Usage
Arguments
Details
Value
View source: R/kersplat-simulate.R
Description
Select regulator genes in the gene network for a Kersplat simulation
Usage
1
kersplatSelectRegs(params, verbose)
Arguments
params
KersplatParams object containing simulation parameters.
verbose
logical. Whether to print progress messages
Details
Regulators are randomly selected, weighted according to the difference
between their out degree and in degree. This is an arbitrary weighting and
may be improved or replace in the future.
Value
KersplatParams object with gene regulators
splatter documentation built on Dec. 3, 2020, 2:01 a.m.
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Description Usage Arguments Details Value
View source: R/kersplat-simulate.R
Description
Select regulator genes in the gene network for a Kersplat simulation
Usage
1 | kersplatSelectRegs(params, verbose)
|
Arguments
params |
KersplatParams object containing simulation parameters. |
verbose |
logical. Whether to print progress messages |
Details
Regulators are randomly selected, weighted according to the difference between their out degree and in degree. This is an arbitrary weighting and may be improved or replace in the future.
Value
KersplatParams object with gene regulators
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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