barplotshow: Shows barplot with amino acid variation on the specified...
In BALCONY: Better ALignment CONsensus analYsis

This function facilitates a visual inspection of multiple sequence alignment (MSA) position variablity.

1	barplotshow(position, AA_variation)

`position`	A number of column of alignment to be visualized
`AA_variation`	A percentage frequency of amino acids in the alignment, calculated with `calculate_AA_variation` function

This function produces a barchart

Alicja Pluciennik & Michal Stolarczyk

data("small_alignment")
position = 100
threshold = 0.01
var_aa = calculate_AA_variation(small_alignment,threshold)
barplotshow(position, var_aa)

BALCONY documentation built on May 1, 2019, 10:31 p.m.

BALCONY index

README.md

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