preprocess_hmm_output: preprocess HMM output
In BALCONY: Better ALignment CONsensus analYsis
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Preprocessing od HMMER output file to calculate CRE.
Usage
1
preprocess_hmm_output(hmm_out)
Arguments
hmm_out
path to ouptut file
Value
Returns list of
probabilities
probabilities extracted from file
alignment_positions
index of each alignment position
Author(s)
Michal Stolarczyk & Alicja Pluciennik
See Also
CRE_conservativity()
Examples
1
#No example due to external software requirements
BALCONY documentation built on May 1, 2019, 10:31 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Preprocessing od HMMER output file to calculate CRE.
Usage
1 | preprocess_hmm_output(hmm_out)
|
Arguments
hmm_out |
path to ouptut file |
Value
Returns list of
probabilities |
probabilities extracted from file |
alignment_positions |
index of each alignment position |
Author(s)
Michal Stolarczyk & Alicja Pluciennik
See Also
CRE_conservativity()
Examples
1 | #No example due to external software requirements
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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