delete_isoforms: Delete protein isoforms from alignment object
In BALCONY: Better ALignment CONsensus analYsis
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
This function searches for isoforms in the alignment object (entries with "-digit|" in the name) and deletes them
Usage
1
Arguments
alignment
An object (S3) class alignment read with read.alignment function
Details
The isoforms are detected as entries with "-digit|" in the sequence name. If no isoforms are detected this function prints a "No isiforms detected" notification instead
Value
Alignment without isoforms - an object (S3) class alignment
Author(s)
Michal Stolarczyk & Alicja Pluciennik
See Also
Examples
1
2
data("alignment")
delete_isoforms(alignment)
BALCONY documentation built on May 1, 2019, 10:31 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
This function searches for isoforms in the alignment object (entries with "-digit|" in the name) and deletes them
Usage
1 |
Arguments
alignment |
An object (S3) class alignment read with |
Details
The isoforms are detected as entries with "-digit|" in the sequence name. If no isoforms are detected this function prints a "No isiforms detected" notification instead
Value
Alignment without isoforms - an object (S3) class alignment
Author(s)
Michal Stolarczyk & Alicja Pluciennik
See Also
Examples
1 2 | data("alignment")
delete_isoforms(alignment)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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