substitution_mtx: Read a substitution matrix
In BALCONY: Better ALignment CONsensus analYsis
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This function facilitates reading of substitution matrices for further use
Usage
1
substitution_mtx(matrix_name)
Arguments
matrix_name
A string with path to the substitution matrix in a text file to be read
Value
names
A vector of characters with amino acid names included in the matrix
matrix
A numeric matrix with values
Author(s)
Michal Stolarczyk & Alicja Pluciennik
Examples
1
2
path = system.file("extdata", "GONNET.txt", package = "BALCONY")
sub_mat = substitution_mtx(path)
BALCONY documentation built on May 1, 2019, 10:31 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
This function facilitates reading of substitution matrices for further use
Usage
1 | substitution_mtx(matrix_name)
|
Arguments
matrix_name |
A string with path to the substitution matrix in a text file to be read |
Value
names |
A vector of characters with amino acid names included in the matrix |
matrix |
A numeric matrix with values |
Author(s)
Michal Stolarczyk & Alicja Pluciennik
Examples
1 2 | path = system.file("extdata", "GONNET.txt", package = "BALCONY")
sub_mat = substitution_mtx(path)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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