pairwise_alignment_MSA: Calculate pairwise alignment for whole MSA
In BALCONY: Better ALignment CONsensus analYsis
Description
Usage
Arguments
Value
Author(s)
Examples
Description
For given alignment calculate pariwise alignments and returns alignment score.
Usage
1
Arguments
alignment
An alignment object read with read.alignment function
Value
score_mtx
Matrix of alignment scores
Author(s)
Michal Stolarczyk & Alicja Pluciennik
Examples
1
2
data("small_alignment")
pairwiseAlignemnt_scores=pairwise_alignment_MSA(small_alignment)
BALCONY documentation built on May 1, 2019, 10:31 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
For given alignment calculate pariwise alignments and returns alignment score.
Usage
1 |
Arguments
alignment |
An alignment object read with |
Value
score_mtx |
Matrix of alignment scores |
Author(s)
Michal Stolarczyk & Alicja Pluciennik
Examples
1 2 | data("small_alignment")
pairwiseAlignemnt_scores=pairwise_alignment_MSA(small_alignment)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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