post_wrapper: Wrap the post_data() Function

In CEDARS: Simple and Efficient Pipeline for Electronic Health Record Annotation

Description

Posts results of human reviewer annotation to MongoDB. Uses DB credentials pre-loaded in the main environment. For use with Shiny or REST POST (latter yet to be implemented).

Usage

post_wrapper(
  database,
  end_user,
  end_user_password,
  position,
  event_date,
  pt_comments,
  ldap = FALSE
)

Arguments

database	MongoDB database.
end_user	CEDARS end user name.
end_user_password	CEDARS end user password.
position	Sentence position within the sequence of selected sentences for a given patient.
event_date	Date of clinical event as determined by human reviewer.
pt_comments	Patient-specific comments from the reviewer.
ldap	Is LDAP authentication being used? If so, password will not be checked and access will be granted automatically.

Value

No return value, called to post data.

Examples

## Not run: 
post_wrapper(database = 'TEST_PROJECT', end_user = 'John', end_user_password = 'db_password_1234',
position = NA, event_date = NA, pt_comments = 'This is a comment')

## End(Not run)

CEDARS documentation built on Feb. 7, 2021, 5:06 p.m.