dist_replacement-phyDat-missing-integer-method: Compute the kmer replacement distance
In DCLEAR: Distance Based Cell Lineage Reconstruction
dist_replacement,phyDat,missing,integer-method R Documentation
Compute the kmer replacement distance
Description
Compute the kmer replacement distance between sequences
Usage
## S4 method for signature 'phyDat,missing,integer'
dist_replacement(x, kmer_summary, k = 2L, ...)
Arguments
x
input data in phyDat format
kmer_summary
a kmer_summary object
k
k-mer length
...
other arguments passed to substr_kmer
Value
a dist object
Author(s)
Wuming Gong (gongx030@umn.edu)
DCLEAR documentation built on Sept. 14, 2023, 9:09 a.m.
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| dist_replacement,phyDat,missing,integer-method | R Documentation |
Compute the kmer replacement distance
Description
Compute the kmer replacement distance between sequences
Usage
## S4 method for signature 'phyDat,missing,integer'
dist_replacement(x, kmer_summary, k = 2L, ...)
Arguments
x |
input data in phyDat format |
kmer_summary |
a kmer_summary object |
k |
k-mer length |
... |
other arguments passed to substr_kmer |
Value
a dist object
Author(s)
Wuming Gong (gongx030@umn.edu)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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