simulate_core: simulate_core
In DCLEAR: Distance Based Cell Lineage Reconstruction
simulate_core R Documentation
simulate_core
Description
Simulate a cell lineage tree
Adoped from https://github.com/elifesciences-publications/CRISPR_recorders_sims/blob/master/MATLAB_sims/GESTALT_30hr_1x_simulation.m
Usage
simulate_core(config, tree, mutation_site, outcome)
Arguments
config
simulation configuration; a lineage_tree_config object
tree
a matrix representing the lineage tree
mutation_site
a binary matrix indicating the mutation sites
outcome
a character matrix
Value
a 'lineage_tree' object
DCLEAR documentation built on Sept. 14, 2023, 9:09 a.m.
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| simulate_core | R Documentation |
simulate_core
Description
Simulate a cell lineage tree Adoped from https://github.com/elifesciences-publications/CRISPR_recorders_sims/blob/master/MATLAB_sims/GESTALT_30hr_1x_simulation.m
Usage
simulate_core(config, tree, mutation_site, outcome)
Arguments
config |
simulation configuration; a lineage_tree_config object |
tree |
a matrix representing the lineage tree |
mutation_site |
a binary matrix indicating the mutation sites |
outcome |
a character matrix |
Value
a 'lineage_tree' object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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