dist_kmer_replacement_inference: Core function of computing kmer replacement distance
In DCLEAR: Distance Based Cell Lineage Reconstruction
View source: R/dist_replacement.r
dist_kmer_replacement_inference R Documentation
Core function of computing kmer replacement distance
Description
Compute the sequence distance matrix using inferred kmer replacement matrix
Usage
dist_kmer_replacement_inference(x, kmer_summary, k = 2)
Arguments
x
input data in phyDat format
kmer_summary
a kmer_summary object
k
k-mers (default k=2)
Value
a dist object
Author(s)
Wuming Gong (gongx030@umn.edu)
DCLEAR documentation built on Sept. 14, 2023, 9:09 a.m.
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View source: R/dist_replacement.r
| dist_kmer_replacement_inference | R Documentation |
Core function of computing kmer replacement distance
Description
Compute the sequence distance matrix using inferred kmer replacement matrix
Usage
dist_kmer_replacement_inference(x, kmer_summary, k = 2)
Arguments
x |
input data in phyDat format |
kmer_summary |
a kmer_summary object |
k |
k-mers (default k=2) |
Value
a dist object
Author(s)
Wuming Gong (gongx030@umn.edu)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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