Man pages for EHR
Electronic Health Record (EHR) Data Processing and Analysis Tool
| addLastDose | Add Lastdose Data |
| analysisPheWAS | Statistical Analysis for PheWAS |
| buildDose | Combine Dose Data |
| build-internal | Internal functions for buildDose process |
| build_lastdose | PK oral functions |
| collapseDose | Collapse Dose Data |
| collapse-internal | Internal functions for collapseDose process |
| dataTransformation | Data Transformation |
| dd | dd |
| dd.baseline | dd.baseline |
| dd.baseline.small | dd.baseline.small |
| dd.small | dd.small |
| EHR-package | Electronic Health Record (EHR) Data Processing and Analysis... |
| extractMed | Extract medication information from clinical notes |
| extractMed-internal | Internal functions for Extract-Med module |
| freqNum | Convert Character Frequency to Numeric |
| idCrosswalk | Create ID Crosswalk |
| lam_metadata | Example of Metadata for Lamotrigine Data |
| lam_mxr_parsed | Example of Lamotrigine Output from 'parseMedExtractR' |
| lastdose-internal | Internal functions for lastdose |
| Logistf | Firth's penalized-likelihood logistic regression with more... |
| makeDose | Make Dose Data |
| mod-internal | Internal functions for EHR modules |
| parseCLAMP | Parse CLAMP NLP Output |
| parse-internal | Internal functions for parse process |
| parseMedEx | Parse MedEx NLP Output |
| parseMedExtractR | Parse medExtractR NLP Output |
| parseMedXN | Parse MedXN NLP Output |
| pk-internal | Internal functions for pk analysis |
| processLastDose | Process and standardize extracted last dose times |
| pullFakeId | Pull Fake/Mod ID |
| pullRealId | Pull Real ID |
| readTransform | Read and Transform |
| run_Build_PK_IV | Build-PK-IV Module |
| run_Build_PK_Oral | Build-PK-Oral Module |
| run_Demo | Run Demographic Data |
| run_DrugLevel | Run Drug Level Data |
| run_Labs | Run Lab Data |
| run_MedStrI | Run Str Data I |
| run_MedStrII | Run Structured E-Prescription Data |
| stdzDose | Standardize Dose Entity |
| stdzDoseChange | Standardize Dose Change Entity |
| stdzDoseSchedule | Standardize Dose Schedule Entity |
| stdzDuration | Standardize Duration Entity |
| stdzFreq | Standardize Frequency Entity |
| stdzRoute | Standardize Route Entity |
| stdzStrength | Standardize Strength Entity |
| tac_lab | Example of Lab Time Data for Tacrolimus |
| tac_metadata | Example of Metadata for Tacrolimus Data |
| tac_mxr_parsed | Example of Tacrolimus Output from 'parseMedExtractR' |
| writeCheckData | Write Check File as CSV |
| zeroOneTable | Make Zero One Contingency Tables |
