evalplot.grps: Partition group plots

In ENMeval: Automated Tuning and Evaluations of Ecological Niche Models

Partition group plots

Description

Plot occurrence partition groups over an environmental predictor raster.

Usage

evalplot.grps(
  e = NULL,
  envs,
  pts = NULL,
  pts.grp = NULL,
  ref.data = "occs",
  pts.size = 1.5,
  return.tbl = FALSE
)

Arguments

e	ENMevaluation object
envs	RasterStack: environmental predictor variable used to build the models in "e"
pts	matrix / data frame: coordinates for occurrence or background data
pts.grp	numeric vector: partition groups corresponding to data in "pts"
ref.data	character: plot occurrences ("occs") or background ("bg"), with default "occs"
pts.size	numeric: custom point size for ggplot
return.tbl	boolean: if TRUE, return the data frames used to make the ggplot instead of the plot itself

Details

This function serves as a quick way to visualize occurrence or background partitions over the extent of an environmental predictor raster. It can be run with an existing ENMevaluation object, or alternatively with occurrence or background coordinates and the corresponding partitions.

ENMeval documentation built on Jan. 9, 2023, 5:08 p.m.