EcoGenetics
Management and Exploratory Analysis of Spatial Data in Landscape Genetics

Package index
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Vignettes
Functions
519
Source code
90
Man pages
202
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EcoGenetics: Management and Exploratory Analysis of Spatial Data in Landscape Genetics
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API

API for EcoGenetics
Management and Exploratory Analysis of Spatial Data in Landscape Genetics

Global functions
$,ecogen,character-method Man page
$,ecogen-method Man page
$,ecopop,character-method Man page
$,ecopop-method Man page
$<-,ecogen,character,ANY-method Man page
$<-,ecogen-method Man page
$<-,ecopop,character,ANY-method Man page
$<-,ecopop-method Man page
%>% Man page
.onAttach Source code
.printaccess Man page Source code
E Man page
EcoGenetics Man page
EcoGenetics accessors Man page
EcoGenetics-package Man page
G Man page
P Man page
S Man page
XY Man page
[,ecogen,character,missing-method Man page
[,ecogen,logical,missing,ANY-method Man page
[,ecogen,logicalORmissing,missing,ANY-method Man page
[,ecogen,numeric,missing,ANY-method Man page
[,ecogen,numericORmissing,missing,ANY-method Man page
[,ecopop,character,missing-method Man page
[,ecopop,logical,missing,ANY-method Man page
[,ecopop,logicalORmissing,missing,ANY-method Man page
[,ecopop,numeric,missing,ANY-method Man page
[,ecopop,numericORmissing,missing,ANY-method Man page
[[,ecogen,character,missing-method Man page
[[,ecogen,numeric,missing-method Man page
[[,ecopop,character,missing-method Man page
[[<-,ecogen,character,missing-method Man page
[[<-,ecogen,numeric,missing-method Man page
[[<-,ecopop,character,missing-method Man page
as.int.list Man page
as.list,ecogen-method Man page
as.list,ecopop-method Man page
aue.access Man page Source code
aue.ad2wg Man page Source code
aue.aggregated_df Man page Source code
aue.char2num Source code
aue.check_class Man page Source code
aue.circle Man page Source code
aue.circle.w Man page Source code
aue.dataAngle Man page Source code
aue.df2image Man page Source code
aue.dummy2af Man page Source code
aue.ellipse Man page Source code
aue.filter Source code
aue.formatLine Man page Source code
aue.fqal Man page Source code
aue.genlab Man page Source code
aue.geom.dist Man page Source code
aue.get_os Man page Source code
aue.idig Source code
aue.image2df Man page Source code
aue.is.poly Man page Source code
aue.phenosimil Man page Source code
aue.point Man page Source code
aue.rescale Man page Source code
aue.rm.nonpoly Man page Source code
aue.rmspaces Man page Source code
aue.rotate Man page Source code
aue.seqlist Man page Source code
aue.sort Man page Source code
aue.split_categorical Man page Source code
aue.square Man page Source code
check_ecogen Man page Source code
check_ecopop Man page Source code
coordinates Man page
dim,ecogen-method Man page
dim,ecopop-method Man page
eco Man page
eco.2columns Source code
eco.2geneland Source code
eco.2genepop Source code
eco.2genind Source code
eco.2gstudio Source code
eco.2hierfstat Source code
eco.2spagedi Source code
eco.IBD-class Man page
eco.NDVI Man page
eco.NDVI.post Man page
eco.alfreq Man page
eco.append Source code
eco.association Man page
eco.bearing Man page
eco.cbind Man page
eco.clear Man page Source code
eco.convert Man page
eco.cormantel Man page
eco.correlog Man page
eco.correlog-class Man page
eco.correlogB-class Man page
eco.detrend Man page
eco.detrend-class Man page
eco.dom_af Man page
eco.fill_ecogen_with_df Man page Source code
eco.fill_ecogen_with_ecopop Man page Source code
eco.forestplot Man page
eco.forestplot,dataframeORmatrix-method Man page
eco.forestplot,eco.lsa-method Man page
eco.forestplot,generic-method Man page
eco.format Man page
eco.formula Man page
eco.genepop2df Source code
eco.gsa Man page
eco.gsa-class Man page
eco.kin.hardy Man page Source code
eco.kin.loiselle Man page Source code
eco.lagweight Man page
eco.lagweight-class Man page
eco.listlsa-class Man page
eco.listsa-class Man page
eco.listw2ew Man page Source code
eco.lmtree Man page
eco.lock Man page
eco.lock,ecogen Man page
eco.lock,ecogen-method Man page
eco.lock,ecopop Man page
eco.lock,ecopop-method Man page
eco.lsa Man page
eco.lsa-class Man page
eco.malecot Man page Source code
eco.mantel Man page
eco.mctree-class Man page
eco.merge Man page
eco.mlm-class Man page
eco.multilsa-class Man page
eco.nei_dist Man page
eco.old2new Man page
eco.old2new,ecogen Man page
eco.old2new,ecogen-method Man page
eco.old2new,ecopop Man page
eco.old2new,ecopop-method Man page
eco.order Man page Source code
eco.pairtest Man page
eco.plotCorrelog Man page
eco.plotCorrelogB Man page
eco.plotGlobal Man page Source code
eco.plotLocal Man page Source code
eco.plotWeight Man page Source code
eco.post.geneland Man page
eco.rankplot Man page
eco.rankplot,eco.lsa,missing,missing-method Man page
eco.rankplot,eco.lsa-method Man page
eco.rankplot,factor,dataframeORmatrix,missing-method Man page
eco.rankplot,factor-method Man page
eco.rankplot,numeric,dataframeORmatrix,missing-method Man page
eco.rankplot,numeric-method Man page
eco.rasterplot Man page
eco.rasterplot,eco.multilsa-method Man page
eco.rbind Man page
eco.remove Man page
eco.slide.con Man page Source code
eco.slide.matrix Man page Source code
eco.split Man page
eco.subset Man page
eco.theilsen Man page
eco.unlock Man page
eco.unlock,ecogen Man page
eco.unlock,ecogen-method Man page
eco.unlock,ecopop Man page
eco.unlock,ecopop-method Man page
eco.variogram Man page
eco.variogram-class Man page
eco.weight Man page
eco.weight-class Man page
eco2 Man page
eco3 Man page
eco4 Man page
eco_dom Man page
ecogen Man page
ecogen-class Man page
ecogen2ecopop Man page
ecogen2geneland Man page
ecogen2genepop Man page
ecogen2genind Man page
ecogen2gstudio Man page
ecogen2hierfstat Man page
ecogen2spagedi Man page
ecogenetics_devel Man page Source code
ecogenetics_tutorial Man page Source code
ecolist-class Man page
ecopop Man page
ecopop-class Man page
ecopop2genpop Man page
ecopop_counts2af Man page
ecoslot.A Man page
ecoslot.A,ecogen-method Man page
ecoslot.A<- Man page
ecoslot.A<-,ecogen-method Man page
ecoslot.AF Man page
ecoslot.AF,ecopop-method Man page
ecoslot.AF<- Man page
ecoslot.AF<-,ecopop-method Man page
ecoslot.ALTER Man page Source code
ecoslot.ANALYSIS Man page Source code
ecoslot.ANOVA.MLM Man page Source code
ecoslot.AVERAGE Man page Source code
ecoslot.BREAKS Man page Source code
ecoslot.C Man page
ecoslot.C,ecogen-method Man page
ecoslot.C,ecopop-method Man page
ecoslot.C<- Man page
ecoslot.C<-,ecogen-method Man page
ecoslot.C<-,ecopop-method Man page
ecoslot.CARDINAL Man page Source code
ecoslot.COND Man page Source code
ecoslot.CONNECTED Man page Source code
ecoslot.DF1 Man page Source code
ecoslot.DF2 Man page Source code
ecoslot.DISTMETHOD Man page Source code
ecoslot.E Man page
ecoslot.E,ecogen-method Man page
ecoslot.E,ecopop-method Man page
ecoslot.E<- Man page
ecoslot.E<-,ecogen-method Man page
ecoslot.E<-,ecopop-method Man page
ecoslot.EXP Man page Source code
ecoslot.FREQUENCIES Man page Source code
ecoslot.G Man page
ecoslot.G,ecogen-method Man page
ecoslot.G<- Man page
ecoslot.G<-,ecogen-method Man page
ecoslot.GF Man page Source code
ecoslot.IN Man page Source code
ecoslot.LOGMEAN Man page Source code
ecoslot.LWR Man page Source code
ecoslot.MEAN Man page Source code
ecoslot.METHOD Man page Source code
ecoslot.MLM Man page Source code
ecoslot.MODEL Man page Source code
ecoslot.MULTI Man page Source code
ecoslot.NAMES Man page Source code
ecoslot.NONZERO Man page Source code
ecoslot.NONZEROIND Man page Source code
ecoslot.NSIM Man page Source code
ecoslot.OBS Man page Source code
ecoslot.OBS.RES Man page Source code
ecoslot.OUT Man page
ecoslot.OUT,ecogen-method Man page
ecoslot.OUT<- Man page
ecoslot.OUT<-,ecogen-method Man page
ecoslot.P Man page
ecoslot.P,ecogen-method Man page
ecoslot.P,ecopop-method Man page
ecoslot.P<- Man page
ecoslot.P<-,ecogen-method Man page
ecoslot.P<-,ecopop-method Man page
ecoslot.PADJUST Man page Source code
ecoslot.PAR Man page Source code
ecoslot.PAR.VAL Man page Source code
ecoslot.POLY.DEG Man page Source code
ecoslot.POP Man page Source code
ecoslot.PREDICTIONS Man page Source code
ecoslot.PVAL Man page Source code
ecoslot.RES Man page Source code
ecoslot.ROW.SD Man page Source code
ecoslot.S Man page
ecoslot.S,ecogen-method Man page
ecoslot.S,ecopop-method Man page
ecoslot.S<- Man page
ecoslot.S<-,ecogen-method Man page
ecoslot.S<-,ecopop-method Man page
ecoslot.SELF Man page Source code
ecoslot.SP Man page Source code
ecoslot.SUMMARY.MLM Man page Source code
ecoslot.TEST Man page Source code
ecoslot.TREES Man page Source code
ecoslot.UPPR Man page Source code
ecoslot.W Man page Source code
ecoslot.XY Man page
ecoslot.XY,ecogen-method Man page
ecoslot.XY,ecopop-method Man page
ecoslot.XY<- Man page
ecoslot.XY<-,ecogen-method Man page
ecoslot.XY<-,ecopop-method Man page
environment Man page
genepop2ecogen Man page
genind2ecogen Man page
genotype Man page
genotype_dom Man page
genpop2ecopop Man page
grf.multiplot Man page
grf.seqmultiplot Man page
gstudio2ecogen Man page
int.al2list Source code
int.al2listal Source code
int.al2loc Source code
int.break Man page Source code
int.check.colnames Man page Source code
int.check.con Man page Source code
int.check.group Man page Source code
int.check.ncod Man page Source code
int.check.numeric Man page Source code
int.check.rownames Man page Source code
int.check.to_numeric Man page Source code
int.check.vnames Man page Source code
int.corvarToDeg Man page Source code
int.crosscor Man page Source code
int.df2genind Man page Source code
int.ecoslot.INT Man page
int.ecoslot.INT,ecogen-method Man page
int.ecoslot.INT<- Man page
int.geary Man page Source code
int.gendata-class Man page
int.gendata2genind Man page Source code
int.genind Man page Source code
int.genind-class Man page
int.genind2df Man page Source code
int.genind2gendata Man page Source code
int.jackknife Man page Source code
int.joincount Man page Source code
int.kin.loiselle Man page Source code
int.list2al Source code
int.list2list Source code
int.list2listal Source code
int.list2loc Source code
int.listal2al Source code
int.listal2list Source code
int.listal2loc Source code
int.loc2al Man page Source code
int.loc2list Source code
int.loc2listal Source code
int.loc2loc Source code
int.mantel Man page Source code
int.moran Man page Source code
int.multiplot Man page Source code
int.multiplot-class Man page
int.multitable Man page Source code
int.order Man page
int.popdata-class Man page
int.random.test Man page Source code
is,ecogen-method Man page
is,ecopop-method Man page
is.ecogen Man page Source code
is.ecopop Man page Source code
is.locked Man page
is.locked,ecogen Man page
is.locked,ecogen-method Man page
is.locked,ecopop Man page
is.locked,ecopop-method Man page
is.meta Man page Source code
is.wholenumber Man page Source code
meta2char Man page Source code
misc.2symmetric Man page Source code
misc.dlatlon2distm Man page Source code
misc.parse.filter Man page Source code
misc.undimmattg Man page Source code
my_ecopop Man page
names,ecogen-method Man page
names,ecopop-method Man page
names<-,ecogen,character-method Man page
names<-,ecopop,any_vector-method Man page
ncol,ecogen-method Man page
ncol,ecopop-method Man page
nrow,ecogen-method Man page
nrow,ecopop-method Man page
phenotype Man page
plot,eco.IBD,ANY-method Man page
plot,eco.IBD-method Man page
plot,eco.correlog,ANY-method Man page
plot,eco.correlog-method Man page
plot,eco.gsa,ANY-method Man page
plot,eco.gsa-method Man page
plot,eco.listlsa,ANY-method Man page
plot,eco.listlsa-method Man page
plot,eco.lsa,ANY-method Man page
plot,eco.lsa-method Man page
plot,eco.multilsa,ANY-method Man page
plot,eco.multilsa-method Man page
plot,eco.weight,ANY-method Man page
plot,eco.weight-method Man page
show,eco.IBD-method Man page
show,eco.correlog-method Man page
show,eco.detrend-method Man page
show,eco.gsa-method Man page
show,eco.lagweight-method Man page
show,eco.listlsa-method Man page
show,eco.lsa-method Man page
show,eco.mctree-method Man page
show,eco.mlm-method Man page
show,eco.multilsa-method Man page
show,eco.weight-method Man page
show,ecogen-method Man page
show,ecopop-method Man page
spagedi2ecogen Man page
structure Man page
summary,eco.lmtree-method Man page
summary,eco.mctree-method Man page
summary,eco.mlm-method Man page
tab Man page
table.sokal Man page
EcoGenetics documentation built on July 8, 2020, 5:46 p.m.

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