norm_internal_assay_median: Compute median value of the quantification method for each...

In OlinkAnalyze: Facilitate Analysis of Proteomic Data from Olink

Compute median value of the quantification method for each Olink assay

Description

The function computes the median value of the the quantification method for each Olink assay in the set of samples samples, and it adds the column Project.

Usage

norm_internal_assay_median(df, samples, name, cols)

Arguments

df	The dataset to calculate medians from (required).
samples	Character vector of sample identifiers to be used for adjustment factor calculation in the dataset df (required).
name	Project name of the dataset that will be added in the column Project (required).
cols	Named list of column names identified in the dataset df (required).

Details

This function is typically used by internal functions norm_internal_subset and norm_internal_reference_median that compute median quantification value for each assay across multiple samples specified by samples.

Value

Tibble or ArrowObject with one row per Olink assay and the columns OlinkID, Project, and assay_med

Author(s)

Klev Diamanti

OlinkAnalyze documentation built on Sept. 25, 2024, 9:07 a.m.