Description Usage Arguments Value Author(s) See Also
Estimate a threshold for calling allelic balance from DH to be used by the *callAB()
method.
1 2 3 |
scale |
An optional |
flavor |
A |
... |
Additional arguments passed to the estimator. |
max |
(Optional) The maximum estimate allowed. If greater than this value, the estimate will be truncated. |
verbose |
See |
Returns the threshold estimate as a numeric
scalar.
Henrik Bengtsson
Internally, one of the following methods are used:
*estimateDeltaABBySmallDH()
,
*estimateStdDevForHeterozygousBAF()
,
*estimateMeanForDH()
, and
*estimateHighDHQuantileAtAB()
.
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