hclustCNs.AbstractCBS: Performs a hierarchical clustering of the CN mean levels

In PSCBS: Analysis of Parent-Specific DNA Copy Numbers

Performs a hierarchical clustering of the CN mean levels

Description

Performs a hierarchical clustering of the CN mean levels.

Usage

## S3 method for class 'AbstractCBS'
hclustCNs(fit, size=NULL, distMethod="euclidean", hclustMethod="ward.D", ...,
  verbose=FALSE)

Arguments

size	Argument passed to *sampleCNs().
distMethod, hclustMethod	Argument method for dist and "stats::hclust", respectively.
...	Not used.
verbose	See Verbose.

Value

Returns a hclust object as returned by hclust.

Author(s)

Henrik Bengtsson

See Also

This method is utilized by *pruneByHClust().

PSCBS documentation built on May 29, 2024, 5:59 a.m.