ScoreInAlignWindow: Compute the fraction of features per Raw file which have an...

Description Usage Arguments Value

View source: R/fcn_MQalign.R

Description

Using the result from 'alignmentCheck()', score the features of every Raw file and see if they have been properly aligned. Returned value is between 0 (bad) and 1 (all aligned).

Usage

1
ScoreInAlignWindow(data, allowed.deltaRT = 1)

Arguments

data

A data.frame with columns 'rtdiff' and 'raw.file'

allowed.deltaRT

The allowed matching difference (1 minute by default)

Value

A data.frame with one row for each raw.file and columns 'raw.file' and 'withinRT' (0-1)


PTXQC documentation built on Feb. 9, 2018, 6:08 a.m.