ScoreInAlignWindow: Compute the fraction of features per Raw file which have an...
In PTXQC: Quality Report Generation for MaxQuant and mzTab Results
ScoreInAlignWindow R Documentation
Compute the fraction of features per Raw file which have an acceptable RT difference after alignment
Description
Using the result from 'alignmentCheck()', score the features of every Raw file and see if they
have been properly aligned.
Returned value is between 0 (bad) and 1 (all aligned).
Usage
ScoreInAlignWindow(data, allowed.deltaRT = 1)
Arguments
data
A data.frame with columns 'rtdiff' and 'raw.file'
allowed.deltaRT
The allowed matching difference (1 minute by default)
Value
A data.frame with one row for each raw.file and columns 'raw.file' and 'withinRT' (0-1)
PTXQC documentation built on May 29, 2024, 9:26 a.m.
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| ScoreInAlignWindow | R Documentation |
Compute the fraction of features per Raw file which have an acceptable RT difference after alignment
Description
Using the result from 'alignmentCheck()', score the features of every Raw file and see if they have been properly aligned. Returned value is between 0 (bad) and 1 (all aligned).
Usage
ScoreInAlignWindow(data, allowed.deltaRT = 1)
Arguments
data |
A data.frame with columns 'rtdiff' and 'raw.file' |
allowed.deltaRT |
The allowed matching difference (1 minute by default) |
Value
A data.frame with one row for each raw.file and columns 'raw.file' and 'withinRT' (0-1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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