plot_MBRgain: Plot MaxQuant Match-between-runs id transfer performance as a...
In PTXQC: Quality Report Generation for MaxQuant and mzTab Results

plot_MBRgain

R Documentation

Plot MaxQuant Match-between-runs id transfer performance as a scatterplot.

Description

Per Raw file, the absolute number of transferred IDs as well as the relative gain in percent.

Usage

plot_MBRgain(data, title_sub = "")

Arguments

`data`	A data.frame with columns as described above
`title_sub`	Subtitle text

Details

The input is a data.frame with columns 'fc.raw.file' - raw file name 'abs' - absolute number of transferred ID's 'pc' - gain on top of genuine IDs [ where each row represents one rawfile.

Value

GGplot object

Examples

 data = data.frame(fc.raw.file = paste("file", letters[1:4]),
                   abs = c(5461, 5312, 3618, 502), 
                   pc = c(34, 32, 22, 2))
 plot_MBRgain(data, "MBR gain: 18%")

PTXQC documentation built on April 3, 2025, 9:28 p.m.