plot_TIC: Plot Total Ion Count over time

In PTXQC: Quality Report Generation for MaxQuant and mzTab Results

Plot Total Ion Count over time

Description

The input is a data.frame with already averaged counts over binned RT-slices.

Usage

plot_TIC(data, x_lim, y_lim)

Arguments

data	A data.frame with columns 'fc.raw.file', 'RT', 'intensity'
x_lim	Plot range of x-axis
y_lim	Plot range of y-axis

Value

GGplot object

Examples

 data = data.frame(fc.raw.file = rep(c("file A", "file B", "file C"), each=81),
                   RT = c(20:100), 
                   intensity = c(rnorm(81, mean=20), rnorm(81, mean=10), rnorm(81, mean=30)))
 plot_TIC(data, c(10, 100), c(0, 40))

PTXQC documentation built on May 29, 2024, 9:26 a.m.