| do.rsr | R Documentation |
Given a data matrix X where observations are stacked in a row-wise manner,
Regularized Self-Representation (RSR) aims at finding a solution to following optimization problem
\textrm{min}~ \|X-XW\|_{2,1} + \lambda \| W \|_{2,1}
where \|W\|_{2,1} = \sum_{i=1}^{m} \|W_{i:} \|_2 is an \ell_{2,1} norm that imposes
row-wise sparsity constraint.
do.rsr(X, ndim = 2, lbd = 1)
X |
an |
ndim |
an integer-valued target dimension. |
lbd |
nonnegative number to control the degree of self-representation by imposing row-sparsity. |
a named Rdimtools S3 object containing
an (n\times ndim) matrix whose rows are embedded observations.
a length-ndim vector of indices with highest scores.
a (p\times ndim) whose columns are basis for projection.
name of the algorithm.
Kisung You
zhu_unsupervised_2015Rdimtools
## load iris data
data(iris)
set.seed(100)
subid = sample(1:150,50)
X = as.matrix(iris[subid,1:4])
label = as.factor(iris[subid,5])
#### try different lbd combinations
out1 = do.rsr(X, lbd=0.1)
out2 = do.rsr(X, lbd=1)
out3 = do.rsr(X, lbd=10)
#### visualize
opar <- par(no.readonly=TRUE)
par(mfrow=c(1,3))
plot(out1$Y, pch=19, col=label, main="RSR::lbd=0.1")
plot(out2$Y, pch=19, col=label, main="RSR::lbd=1")
plot(out3$Y, pch=19, col=label, main="RSR::lbd=10")
par(opar)
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