custom_modulelist_from_org: Custom modulelist from a specific organism

In ReporterScore: Generalized Reporter Score-Based Enrichment Analysis for Omics Data

Custom modulelist from a specific organism

Description

Custom modulelist from a specific organism

Usage

custom_modulelist_from_org(
  org = "hsa",
  feature = "ko",
  gene = "symbol",
  verbose = TRUE
)

Arguments

org	kegg organism, listed in https://www.genome.jp/kegg/catalog/org_list.html, default, "hsa"
feature	one of "ko", "gene", "compound"
gene	one of "symbol","id"
verbose	logical

Value

modulelist

See Also

Other modulelist: custom_modulelist(), get_features()

Examples

hsa_pathway <- custom_modulelist_from_org(org = "hsa", feature = "gene")

ReporterScore documentation built on Sept. 11, 2024, 6:44 p.m.