Format10X_GeoJson_CellID: Format 10X Genomics GeoJson cell IDs
In Seurat: Tools for Single Cell Genomics
View source: R/preprocessing.R
Format10X_GeoJson_CellID R Documentation
Format 10X Genomics GeoJson cell IDs
Description
Format 10X Genomics GeoJson cell IDs
Usage
Format10X_GeoJson_CellID(ids, prefix = "cellid_", suffix = "-1", digits = 9)
Arguments
ids
Vector of cell IDs to format
prefix
Optional prefix string
suffix
Optional suffix string
digits
Number of digits to zero-pad
A helper function to format cell IDs from the segmentation GeoJson to the same type as in the matrix.h5
The GeoJson has cell IDs as integers (eg 1). They need to be in the format cellid_000000001-1
Value
Vector of formatted cell IDs
Seurat documentation built on Dec. 14, 2025, 9:07 a.m.
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View source: R/preprocessing.R
| Format10X_GeoJson_CellID | R Documentation |
Format 10X Genomics GeoJson cell IDs
Description
Format 10X Genomics GeoJson cell IDs
Usage
Format10X_GeoJson_CellID(ids, prefix = "cellid_", suffix = "-1", digits = 9)
Arguments
ids |
Vector of cell IDs to format |
prefix |
Optional prefix string |
suffix |
Optional suffix string |
digits |
Number of digits to zero-pad A helper function to format cell IDs from the segmentation GeoJson to the same type as in the matrix.h5 The GeoJson has cell IDs as integers (eg 1). They need to be in the format cellid_000000001-1 |
Value
Vector of formatted cell IDs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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