Read10X_HD_GeoJson: Load 10X Genomics GeoJson
In Seurat: Tools for Single Cell Genomics
View source: R/preprocessing.R
Read10X_HD_GeoJson R Documentation
Load 10X Genomics GeoJson
Description
Load 10X Genomics GeoJson
Usage
Read10X_HD_GeoJson(data.dir, segmentation.type = "cell")
Arguments
data.dir
Path to the directory containing matrix data
segmentation.type
Which segmentations to load, cell or nucleus. If using nucleus the full matrix from cells is still used
Value
An sf object containing polygon segmentations from the GeoJSON provided by 10x, formatted for downstream coordinate retrieval
Seurat documentation built on Dec. 14, 2025, 9:07 a.m.
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View source: R/preprocessing.R
| Read10X_HD_GeoJson | R Documentation |
Load 10X Genomics GeoJson
Description
Load 10X Genomics GeoJson
Usage
Read10X_HD_GeoJson(data.dir, segmentation.type = "cell")
Arguments
data.dir |
Path to the directory containing matrix data |
segmentation.type |
Which segmentations to load, cell or nucleus. If using nucleus the full matrix from cells is still used |
Value
An sf object containing polygon segmentations from the GeoJSON provided by 10x, formatted for downstream coordinate retrieval
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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