SingleRasterMap: A single heatmap from ggplot2 using geom_raster

In Seurat: Tools for Single Cell Genomics

A single heatmap from ggplot2 using geom_raster

Description

A single heatmap from ggplot2 using geom_raster

Usage

SingleRasterMap(
  data,
  raster = TRUE,
  cell.order = NULL,
  feature.order = NULL,
  colors = PurpleAndYellow(),
  disp.min = -2.5,
  disp.max = 2.5,
  limits = NULL,
  group.by = NULL
)

Arguments

data	A matrix or data frame with data to plot
raster	switch between geom_raster and geom_tile
cell.order	...
feature.order	...
colors	A vector of colors to use
disp.min	Minimum display value (all values below are clipped)
disp.max	Maximum display value (all values above are clipped)
limits	A two-length numeric vector with the limits for colors on the plot
group.by	A vector to group cells by, should be one grouping identity per cell

Value

A ggplot2 object

Seurat documentation built on Nov. 18, 2023, 1:10 a.m.