merge.SCTAssay: Merge SCTAssay objects

In Seurat: Tools for Single Cell Genomics

Merge SCTAssay objects

Description

Merge SCTAssay objects

Usage

## S3 method for class 'SCTAssay'
merge(
  x = NULL,
  y = NULL,
  add.cell.ids = NULL,
  merge.data = TRUE,
  na.rm = TRUE,
  ...
)

Arguments

x	A Seurat object
y	A single Seurat object or a list of Seurat objects
add.cell.ids	A character vector of length(x = c(x, y)); appends the corresponding values to the start of each objects' cell names
merge.data	Merge the data slots instead of just merging the counts (which requires renormalization); this is recommended if the same normalization approach was applied to all objects
na.rm	If na.rm = TRUE, this will only preserve residuals that are present in all SCTAssays being merged. Otherwise, missing residuals will be populated with NAs.
...	Arguments passed to other methods

Seurat documentation built on May 29, 2024, 4:20 a.m.