GetLinkedGenes: Get genes linked to peaks
In Signac: Analysis of Single-Cell Chromatin Data
GetLinkedGenes R Documentation
Get genes linked to peaks
Description
Find genes linked to a given set of peaks
Usage
GetLinkedGenes(object, features, assay = NULL, min.abs.score = 0)
Arguments
object
A Seurat object
features
A list of peaks to find linked genes for
assay
Name of assay to use. If NULL, use the default assay
min.abs.score
Minimum absolute value of the link score for a link to
be returned
See Also
GetLinkedPeaks
Signac documentation built on Nov. 8, 2023, 5:07 p.m.
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| GetLinkedGenes | R Documentation |
Get genes linked to peaks
Description
Find genes linked to a given set of peaks
Usage
GetLinkedGenes(object, features, assay = NULL, min.abs.score = 0)
Arguments
object |
A Seurat object |
features |
A list of peaks to find linked genes for |
assay |
Name of assay to use. If NULL, use the default assay |
min.abs.score |
Minimum absolute value of the link score for a link to be returned |
See Also
GetLinkedPeaks
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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