GetTSSPositions: Find transcriptional start sites

Description Usage Arguments

View source: R/utilities.R

Description

Get the TSS positions from a set of genomic ranges containing gene positions. Ranges can contain exons, introns, UTRs, etc, rather than the whole transcript. Only protein coding gene biotypes are included in output.

Usage

1
GetTSSPositions(ranges, biotypes = "protein_coding")

Arguments

ranges

A GRanges object containing gene annotations.

biotypes

Gene biotypes to include. If NULL, use all biotypes in the supplied gene annotation.


Signac documentation built on Dec. 11, 2021, 9:55 a.m.