Motifs: Get or set a motif information

In Signac: Analysis of Single-Cell Chromatin Data

Get or set a motif information

Description

Get or set the Motif object for a Seurat object or ChromatinAssay.

Usage

Motifs(object, ...)

Motifs(object, ...) <- value

## S3 method for class 'ChromatinAssay'
Motifs(object, ...)

## S3 method for class 'Seurat'
Motifs(object, ...)

## S3 replacement method for class 'ChromatinAssay'
Motifs(object, ...) <- value

## S3 replacement method for class 'Seurat'
Motifs(object, ...) <- value

Arguments

object	A Seurat object
...	Arguments passed to other methods
value	A Motif object

Examples

Motifs(atac_small[["peaks"]])
Motifs(atac_small)
motifs <- Motifs(atac_small)
Motifs(atac_small[["peaks"]]) <- motifs
motifs <- Motifs(atac_small)
Motifs(atac_small) <- motifs

Signac documentation built on Nov. 8, 2023, 5:07 p.m.