StringToGRanges: String to GRanges
In Signac: Analysis of Single-Cell Chromatin Data
StringToGRanges R Documentation
String to GRanges
Description
Convert a genomic coordinate string to a GRanges object
Usage
StringToGRanges(regions, sep = c("-", "-"), ...)
Arguments
regions
Vector of genomic region strings
sep
Vector of separators to use for genomic string. First element is
used to separate chromosome and coordinates, second separator is used to
separate start and end coordinates.
...
Additional arguments passed to
makeGRangesFromDataFrame
Value
Returns a GRanges object
Examples
regions <- c('chr1-1-10', 'chr2-12-3121')
StringToGRanges(regions = regions)
Signac documentation built on Sept. 11, 2024, 9:30 p.m.
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| StringToGRanges | R Documentation |
String to GRanges
Description
Convert a genomic coordinate string to a GRanges object
Usage
StringToGRanges(regions, sep = c("-", "-"), ...)
Arguments
regions |
Vector of genomic region strings |
sep |
Vector of separators to use for genomic string. First element is used to separate chromosome and coordinates, second separator is used to separate start and end coordinates. |
... |
Additional arguments passed to
|
Value
Returns a GRanges object
Examples
regions <- c('chr1-1-10', 'chr2-12-3121')
StringToGRanges(regions = regions)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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