snp_readBGI: Read variant info from one BGI file
In bigsnpr: Analysis of Massive SNP Arrays
snp_readBGI R Documentation
Read variant info from one BGI file
Description
Read variant info from one BGI file
Usage
snp_readBGI(bgifile, snp_id = NULL)
Arguments
bgifile
Path to one file with extension ".bgi".
snp_id
Character vector of SNP IDs. These should be in the form
"<chr>_<pos>_<a1>_<a2>" (e.g. "1_88169_C_T" or "01_88169_C_T").
This function assumes that these IDs are uniquely identifying variants.
Default is NULL, and returns information on all variants.
Value
A data frame containing variant information.
bigsnpr documentation built on Sept. 30, 2024, 9:18 a.m.
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| snp_readBGI | R Documentation |
Read variant info from one BGI file
Description
Read variant info from one BGI file
Usage
snp_readBGI(bgifile, snp_id = NULL)
Arguments
bgifile |
Path to one file with extension ".bgi". |
snp_id |
Character vector of SNP IDs. These should be in the form
|
Value
A data frame containing variant information.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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