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README.md
In bioseq: A Toolbox for Manipulating Biological Sequences
bioseq: A Toolbox for Manipulating Biological Sequences in R
The purpose of bioseq is to provide a collection of classes and functions for biological sequence manipulation in R. The package provides simple S3 classes for sequences that are suitable for inclusion in a data frame and that can be analysed using the dplyr grammar and other tidyverse tools.
Installation
You can install the development version of bioseq from GitHub with:
remotes::install_github("fkeck/bioseq")
Tutorials
There are two vignettes available to get started with the package:
- Introduction to the
bioseq package
- Cleaning and exploring NCBI data with the
bioseq package
Citation
If you use bioseq please cite Keck F. (2020) Handling biological sequences in R with the bioseq package. Methods in Ecology and Evolution. doi:10.1111/2041-210X.13490
Try the bioseq package in your browser
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bioseq documentation built on Sept. 6, 2022, 5:07 p.m.
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bioseq: A Toolbox for Manipulating Biological Sequences in R
The purpose of bioseq is to provide a collection of classes and functions for biological sequence manipulation in R. The package provides simple S3 classes for sequences that are suitable for inclusion in a data frame and that can be analysed using the dplyr grammar and other tidyverse tools.
Installation
You can install the development version of bioseq from GitHub with:
remotes::install_github("fkeck/bioseq")
Tutorials
There are two vignettes available to get started with the package:
- Introduction to the
bioseqpackage - Cleaning and exploring NCBI data with the
bioseqpackage
Citation
If you use bioseq please cite Keck F. (2020) Handling biological sequences in R with the bioseq package. Methods in Ecology and Evolution. doi:10.1111/2041-210X.13490
Try the bioseq package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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