View source: R/seq_misc_operations.R
seq_disambiguate_IUPAC | R Documentation |
This function finds all the combinations of sequences corresponding to a given vector of sequences with ambiguities (IUPAC codes).
seq_disambiguate_IUPAC(x)
x |
a DNA, RNA or AA vector |
A list of DNA, RNA or AA vectors (depending on the input) giving all possible combinations.
Other op-misc:
seq_nchar()
,
seq_nseq()
,
seq_spellout()
,
seq_stat_gc()
,
seq_stat_prop()
x <- dna(c("AYCTGW", "CTTN")) seq_disambiguate_IUPAC(x) y <- seq_transcribe(x) seq_disambiguate_IUPAC(y) z <- aa("YJSNAALNX") z <- seq_translate(y) seq_disambiguate_IUPAC(z)
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