API for bioseq
A Toolbox for Manipulating Biological Sequences
| Global functions | |
|---|---|
| .onLoad | Source code |
| aa | Man page Source code |
| aliview | Man page Source code |
| alphabets | Man page |
| as-tibble-ape | Man page |
| as-tibble-bioseq | Man page |
| as_AAbin | Man page |
| as_AAbin.bioseq_aa | Source code |
| as_AAbin.tbl_df | Man page Source code |
| as_DNAbin | Man page |
| as_DNAbin.bioseq_dna | Source code |
| as_DNAbin.tbl_df | Man page Source code |
| as_aa | Man page Source code |
| as_character_matrix | Source code |
| as_dna | Man page Source code |
| as_rna | Man page Source code |
| as_seqinr_alignment | Man page |
| as_seqinr_alignment.bioseq_aa | Source code |
| as_seqinr_alignment.bioseq_dna | Source code |
| as_seqinr_alignment.bioseq_rna | Source code |
| as_tibble.AAbin | Man page Source code |
| as_tibble.DNAbin | Man page Source code |
| as_tibble.bioseq_aa | Man page Source code |
| as_tibble.bioseq_dna | Man page Source code |
| as_tibble.bioseq_rna | Man page Source code |
| bioseq | Man page |
| bioseq-package | Man page |
| bioseq_color | Source code |
| check_aa | Source code |
| check_and_prepare_pattern | Source code |
| check_dna | Source code |
| check_dna_rna | Source code |
| check_dna_rna_aa | Source code |
| check_rna | Source code |
| coerce_seq_as_input | Source code |
| delete_gap_cols | Source code |
| dic_aa | Source code |
| dic_dna | Source code |
| dic_genetic_codes | Man page Source code |
| dic_rna | Source code |
| dna | Man page Source code |
| fragilaria | Man page |
| genetic-codes | Man page |
| is_aa | Man page Source code |
| is_dna | Man page Source code |
| is_rna | Man page Source code |
| new_aa | Man page Source code |
| new_dna | Man page Source code |
| new_rna | Man page Source code |
| pillar_sequences | Source code |
| pillar_shaft.bioseq_aa | Man page Source code |
| pillar_shaft.bioseq_dna | Man page Source code |
| pillar_shaft.bioseq_rna | Man page Source code |
| print.bioseq_aa | Source code |
| print.bioseq_dna | Source code |
| print.bioseq_rna | Source code |
| print_sequences | Source code |
| read_fasta | Man page Source code |
| rev_complement | Man page |
| rna | Man page Source code |
| seaview | Man page Source code |
| seq-replace | Man page |
| seq_afind | Source code |
| seq_cluster | Man page Source code |
| seq_combine | Man page Source code |
| seq_complement | Man page Source code |
| seq_consensus | Man page Source code |
| seq_count_pattern | Man page Source code |
| seq_crop_fuzzypattern | Source code |
| seq_crop_pattern | Man page Source code |
| seq_crop_position | Man page Source code |
| seq_detect_fuzzypattern | Source code |
| seq_detect_pattern | Man page Source code |
| seq_disambiguate_IUPAC | Man page Source code |
| seq_extract_pattern | Man page Source code |
| seq_extract_position | Man page Source code |
| seq_nchar | Man page Source code |
| seq_nseq | Man page Source code |
| seq_remove_gap | Source code |
| seq_remove_pattern | Man page Source code |
| seq_remove_position | Man page Source code |
| seq_replace_pattern | Man page Source code |
| seq_replace_position | Man page Source code |
| seq_rev_transcribe | Man page Source code |
| seq_rev_translate | Man page Source code |
| seq_reverse | Man page Source code |
| seq_spellout | Man page Source code |
| seq_split_kmer | Man page Source code |
| seq_split_pattern | Man page Source code |
| seq_stat_gc | Man page Source code |
| seq_stat_prop | Man page Source code |
| seq_transcribe | Man page Source code |
| seq_translate | Man page Source code |
| transcription | Man page |
| validate_seq | Man page Source code |
| vec_cast.bioseq_aa | Man page Source code |
| vec_cast.bioseq_aa.AAbin | Source code |
| vec_cast.bioseq_aa.alignment | Source code |
| vec_cast.bioseq_aa.bioseq_aa | Source code |
| vec_cast.bioseq_aa.character | Source code |
| vec_cast.bioseq_aa.default | Source code |
| vec_cast.bioseq_dna | Man page Source code |
| vec_cast.bioseq_dna.DNAbin | Source code |
| vec_cast.bioseq_dna.alignment | Source code |
| vec_cast.bioseq_dna.bioseq_dna | Source code |
| vec_cast.bioseq_dna.character | Source code |
| vec_cast.bioseq_dna.default | Source code |
| vec_cast.bioseq_rna | Man page Source code |
| vec_cast.bioseq_rna.alignment | Source code |
| vec_cast.bioseq_rna.bioseq_rna | Source code |
| vec_cast.bioseq_rna.character | Source code |
| vec_cast.bioseq_rna.default | Source code |
| vec_cast.character.bioseq_aa | Source code |
| vec_cast.character.bioseq_dna | Source code |
| vec_cast.character.bioseq_rna | Source code |
| vec_ptype2.bioseq_aa | Man page Source code |
| vec_ptype2.bioseq_aa.bioseq_aa | Source code |
| vec_ptype2.bioseq_aa.character | Source code |
| vec_ptype2.bioseq_aa.default | Source code |
| vec_ptype2.bioseq_dna | Man page Source code |
| vec_ptype2.bioseq_dna.bioseq_dna | Source code |
| vec_ptype2.bioseq_dna.character | Source code |
| vec_ptype2.bioseq_dna.default | Source code |
| vec_ptype2.bioseq_rna | Man page Source code |
| vec_ptype2.bioseq_rna.bioseq_rna | Source code |
| vec_ptype2.bioseq_rna.character | Source code |
| vec_ptype2.bioseq_rna.default | Source code |
| vec_ptype2.character.bioseq_aa | Source code |
| vec_ptype2.character.bioseq_dna | Source code |
| vec_ptype2.character.bioseq_rna | Source code |
| vec_ptype_abbr.bioseq_aa | Source code |
| vec_ptype_abbr.bioseq_dna | Source code |
| vec_ptype_abbr.bioseq_rna | Source code |
| write_fasta | Man page Source code |
