API for bioseq
A Toolbox for Manipulating Biological Sequences

Global functions
.onLoad Source code
aa Man page Source code
aliview Man page Source code
alphabets Man page
as-tibble-ape Man page
as-tibble-bioseq Man page
as_AAbin Man page
as_AAbin.bioseq_aa Source code
as_AAbin.tbl_df Man page Source code
as_DNAbin Man page
as_DNAbin.bioseq_dna Source code
as_DNAbin.tbl_df Man page Source code
as_aa Man page Source code
as_character_matrix Source code
as_dna Man page Source code
as_rna Man page Source code
as_seqinr_alignment Man page
as_seqinr_alignment.bioseq_aa Source code
as_seqinr_alignment.bioseq_dna Source code
as_seqinr_alignment.bioseq_rna Source code
as_tibble.AAbin Man page Source code
as_tibble.DNAbin Man page Source code
as_tibble.bioseq_aa Man page Source code
as_tibble.bioseq_dna Man page Source code
as_tibble.bioseq_rna Man page Source code
bioseq Man page
bioseq-package Man page
bioseq_color Source code
check_aa Source code
check_and_prepare_pattern Source code
check_dna Source code
check_dna_rna Source code
check_dna_rna_aa Source code
check_rna Source code
coerce_seq_as_input Source code
delete_gap_cols Source code
dic_aa Source code
dic_dna Source code
dic_genetic_codes Man page Source code
dic_rna Source code
dna Man page Source code
fragilaria Man page
genetic-codes Man page
is_aa Man page Source code
is_dna Man page Source code
is_rna Man page Source code
new_aa Man page Source code
new_dna Man page Source code
new_rna Man page Source code
pillar_sequences Source code
pillar_shaft.bioseq_aa Man page Source code
pillar_shaft.bioseq_dna Man page Source code
pillar_shaft.bioseq_rna Man page Source code
print.bioseq_aa Source code
print.bioseq_dna Source code
print.bioseq_rna Source code
print_sequences Source code
read_fasta Man page Source code
rev_complement Man page
rna Man page Source code
seaview Man page Source code
seq-replace Man page
seq_cluster Man page Source code
seq_combine Man page Source code
seq_complement Man page Source code
seq_consensus Man page Source code
seq_count_pattern Man page Source code
seq_crop_pattern Man page Source code
seq_crop_position Man page Source code
seq_detect_pattern Man page Source code
seq_disambiguate_IUPAC Man page Source code
seq_extract_pattern Man page Source code
seq_extract_position Man page Source code
seq_nchar Man page Source code
seq_nseq Man page Source code
seq_remove_gap Source code
seq_remove_pattern Man page Source code
seq_remove_position Man page Source code
seq_replace_pattern Man page Source code
seq_replace_position Man page Source code
seq_rev_transcribe Man page Source code
seq_rev_translate Man page Source code
seq_reverse Man page Source code
seq_spellout Man page Source code
seq_split_kmer Man page Source code
seq_split_pattern Man page Source code
seq_stat_gc Man page Source code
seq_stat_prop Man page Source code
seq_transcribe Man page Source code
seq_translate Man page Source code
transcription Man page
validate_seq Man page Source code
vec_cast.bioseq_aa Man page Source code
vec_cast.bioseq_aa.AAbin Source code
vec_cast.bioseq_aa.alignment Source code
vec_cast.bioseq_aa.bioseq_aa Source code
vec_cast.bioseq_aa.character Source code
vec_cast.bioseq_aa.default Source code
vec_cast.bioseq_dna Man page Source code
vec_cast.bioseq_dna.DNAbin Source code
vec_cast.bioseq_dna.alignment Source code
vec_cast.bioseq_dna.bioseq_dna Source code
vec_cast.bioseq_dna.character Source code
vec_cast.bioseq_dna.default Source code
vec_cast.bioseq_rna Man page Source code
vec_cast.bioseq_rna.alignment Source code
vec_cast.bioseq_rna.bioseq_rna Source code
vec_cast.bioseq_rna.character Source code
vec_cast.bioseq_rna.default Source code
vec_cast.character.bioseq_aa Source code
vec_cast.character.bioseq_dna Source code
vec_cast.character.bioseq_rna Source code
vec_ptype2.bioseq_aa Man page Source code
vec_ptype2.bioseq_aa.bioseq_aa Source code
vec_ptype2.bioseq_aa.character Source code
vec_ptype2.bioseq_aa.default Source code
vec_ptype2.bioseq_dna Man page Source code
vec_ptype2.bioseq_dna.bioseq_dna Source code
vec_ptype2.bioseq_dna.character Source code
vec_ptype2.bioseq_dna.default Source code
vec_ptype2.bioseq_rna Man page Source code
vec_ptype2.bioseq_rna.bioseq_rna Source code
vec_ptype2.bioseq_rna.character Source code
vec_ptype2.bioseq_rna.default Source code
vec_ptype2.character.bioseq_aa Source code
vec_ptype2.character.bioseq_dna Source code
vec_ptype2.character.bioseq_rna Source code
vec_ptype_abbr.bioseq_aa Source code
vec_ptype_abbr.bioseq_dna Source code
vec_ptype_abbr.bioseq_rna Source code
write_fasta Man page Source code
bioseq documentation built on Nov. 26, 2020, 9:07 a.m.