alphabets: Biological alphabets

alphabetsR Documentation

Biological alphabets

Description

List of the allowed characters for each type of sequences.

DNA

A C G T W S M K R Y B D H V N -

RNA

A C G U W S M K R Y B D H V N -

AA

A C D E F G H I K L M N P Q R S T V W Y B X Z J U O * -

References

Nomenclature Committee of the International Union of Biochemistry (NC-IUB) (1986). Proc. Natl. Acad. Sci. USA. 83 (1): 4–8.

Nomenclature and Symbolism for Amino Acids and Peptides. IUPAC-IUB Joint Commission on Biochemical Nomenclature. 1983.


bioseq documentation built on Sept. 6, 2022, 5:07 p.m.